Matches in Nanopublications for { ?s ?p ?o <http://purl.org/np/RArAFrdM4rux7Cwl-lT_a4JzGk9tcGItbpd7ykkbD3S2M#assertion>. }
- chemical_to_entity_association_mixin_subject label "chemical to entity association mixin subject - the chemical entity or entity that is an interactor" assertion.
- chemical_to_pathway_association_object label "chemical to pathway association object - the pathway that is affected by the chemical" assertion.
- chemical_to_pathway_association_subject label "chemical to pathway association subject - the chemical entity that is affecting the pathway" assertion.
- chemically_similar_to label "chemically similar to - holds between one small molecule entity and another that it approximates for purposes of scientific study, in virtue of its exhibiting similar features of the studied entity." assertion.
- chi_squared_statistic label "chi squared statistic - represents the chi-squared statistic computed from observations" assertion.
- clinical_finding_has_attribute label "clinical finding has attribute - connects any entity to an attribute" assertion.
- clinical_measurement_has_attribute_type label "clinical measurement has attribute type - connects an attribute to a class that describes it" assertion.
- clinical_modifier_qualifier label "clinical modifier qualifier - the method or process of administering a pharmaceutical compound to achieve a therapeutic effect in humans or animals." assertion.
- close_match label "close match - a list of terms from different schemas or terminology systems that have a semantically similar but not strictly equivalent, broader, or narrower meaning. Such terms often describe the same general concept from different ontological perspectives (e.g. drug as a type of chemical entity versus drug as a type of role borne by a chemical entity)." assertion.
- coexists_with label "coexists with - holds between two entities that are co-located in the same aggregate object, process, or spatio-temporal region" assertion.
- coexpressed_with label "coexpressed with - holds between any two genes or gene products, in which both are generally expressed within a single defined experimental context." assertion.
- colocalizes_with label "colocalizes with - holds between two entities that are observed to be located in the same place." assertion.
- composed_primarily_of label "composed primarily of - x composed_primarily_of_y if:more than half of the mass of x is made from parts of y." assertion.
- concept_count_object label "concept count object - The number of instances in a dataset/cohort whose records contain the concept in the object slot of an association." assertion.
- concept_count_subject label "concept count subject - The number of instances in a dataset/cohort whose records contain the concept in the subject slot of an association." assertion.
- concept_pair_count label "concept pair count - The number of instances in a dataset/cohort whose records contain both the subject and object concept of an association." assertion.
- condition_associated_with_gene label "condition associated with gene - holds between a gene and a disease or phenotypic feature that may be influenced, contribute to, or be correlated with the gene or its alleles/products" assertion.
- context_qualifier label "context qualifier - Restricts the setting/context/location where the core concept (or qualified core concept) resides or occurs." assertion.
- contraindicated_for label "contraindicated for - Holds between a drug and a disease or phenotype, such that a person with that disease should not be treated with the drug." assertion.
- contributes_to label "contributes to - holds between two entities where the occurrence, existence, or activity of one causes or contributes to the occurrence or generation of the other" assertion.
- contributor_association_object label "contributor association object - agent helping to realise the given entity (e.g. such as a publication)" assertion.
- contributor_association_predicate label "contributor association predicate - generally one of the predicate values 'provider', 'publisher', 'editor' or 'author'" assertion.
- contributor_association_qualifiers label "contributor association qualifiers - this field can be used to annotate special characteristics of an agent relationship, such as the fact that a given author agent of a publication is the 'corresponding author'" assertion.
- contributor_association_subject label "contributor association subject - information content entity which an agent has helped realise" assertion.
- creation_date label "creation date - date on which an entity was created. This can be applied to nodes or edges" assertion.
- decreased_likelihood_associated_with label "decreased likelihood associated with - " assertion.
- decreases_amount_or_activity_of label "decreases amount or activity of - A grouping mixin to help with searching for all the predicates that decrease the amount or activity of the object." assertion.
- decreases_response_to label "decreases response to - holds between two chemical entities where the action or effect of one decreases the susceptibility of a biological entity or system (e.g. an organism, cell, cellular component, macromolecular machine mixin, biological or pathological process) to the other" assertion.
- derivative_qualifier label "derivative qualifier - A qualifier that composes with a core subject/object concept to describe something that is derived from the core concept. For example, the qualifier ‘metabolite’ combines with a ‘Chemical X’ core concept to express the composed concept ‘a metabolite of Chemical X’." assertion.
- derives_from label "derives from - holds between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity" assertion.
- derives_into label "derives into - holds between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity" assertion.
- diagnoses label "diagnoses - a relationship that identifies the nature of (an illness or other problem) by examination of the symptoms." assertion.
- direction_qualifier label "direction qualifier - Composes with the core concept (+ aspect if provided) to describe a change in its direction or degree." assertion.
- directly_physically_interacts_with label "directly physically interacts with - A causal mechanism mediated by a direct contact between the effector and target entities (this contact may be weak or strong, transient or stable)." assertion.
- disease_has_basis_in label "disease has basis in - A relation that holds between a disease and an entity where the state of the entity has contribution to the disease." assertion.
- disease_has_location label "disease has location - A relationship between a disease and an anatomical entity where the disease has one or more features that are located in that entity." assertion.
- disease_or_phenotypic_feature_to_entity_association_mixin_subject label "disease or phenotypic feature to entity association mixin subject - disease or phenotype" assertion.
- disease_or_phenotypic_feature_to_genetic_inheritance_association_object label "disease or phenotypic feature to genetic inheritance association object - genetic inheritance associated with the specified disease or phenotypic feature." assertion.
- disease_or_phenotypic_feature_to_genetic_inheritance_association_predicate label "disease or phenotypic feature to genetic inheritance association predicate - A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes." assertion.
- disease_or_phenotypic_feature_to_location_association_object label "disease or phenotypic feature to location association object - anatomical entity in which the disease or feature is found." assertion.
- disease_to_entity_association_mixin_subject label "disease to entity association mixin subject - disease class" assertion.
- disease_to_phenotypic_feature_association_object label "disease to phenotypic feature association object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- disease_to_phenotypic_feature_association_subject label "disease to phenotypic feature association subject - connects an association to the subject of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- disrupted_by label "disrupted by - describes a relationship where the structure, function, or occurrence of one entity is degraded or interfered with by another." assertion.
- disrupts label "disrupts - describes a relationship where one entity degrades or interferes with the structure, function, or occurrence of another." assertion.
- drug_regulatory_status_world_wide label "drug regulatory status world wide - An agglomeration of drug regulatory status worldwide. Not specific to FDA." assertion.
- drug_to_entity_association_mixin_subject label "drug to entity association mixin subject - the drug that is an interactor" assertion.
- drug_to_gene_association_object label "drug to gene association object - the gene or gene product that is affected by the drug" assertion.
- druggable_gene_to_disease_association_has_evidence label "druggable gene to disease association has evidence - connects an association to an instance of supporting evidence" assertion.
- druggable_gene_to_disease_association_predicate label "druggable gene to disease association predicate - A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes." assertion.
- druggable_gene_to_disease_association_subject label "druggable gene to disease association subject - gene in which variation is correlated with the disease in a protective manner, or if the product produced by the gene can be targeted by a small molecule and this leads to a protective or improving disease state." assertion.
- editor label "editor - editor of a compiled work such as a book or a periodical (newspaper or an academic journal). Note that in the case of publications which have a containing "published in" node property, the editor association may not be attached directly to the embedded child publication, but only made in between the parent's publication node and the editorial agent of the encompassing publication (e.g. only from the Book referenced by the 'published_in' property of a book chapter Publication node)." assertion.
- enabled_by label "enabled by - holds between a process and a physical entity, where the physical entity executes the process" assertion.
- enables label "enables - holds between a physical entity and a process, where the physical entity executes the process" assertion.
- end_coordinate label "end coordinate - The position at which the subject genomic entity ends on the chromosome or other entity to which it is located on." assertion.
- end_interbase_coordinate label "end interbase coordinate - The position at which the subject nucleic acid entity ends on the chromosome or other entity to which it is located on." assertion.
- entity_to_disease_association_mixin_object label "entity to disease association mixin object - disease" assertion.
- entity_to_disease_or_phenotypic_feature_association_mixin_object label "entity to disease or phenotypic feature association mixin object - disease or phenotype" assertion.
- entity_to_exposure_event_association_mixin_object label "entity to exposure event association mixin object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- entity_to_outcome_association_mixin_object label "entity to outcome association mixin object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- entity_to_phenotypic_feature_association_mixin_object label "entity to phenotypic feature association mixin object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- evidence_count label "evidence count - The number of evidence instances that are connected to an association." assertion.
- exacerbates label "exacerbates - A relationship between an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) and a condition (a phenotype or disease), where the presence of the entity worsens some or all aspects of the condition." assertion.
- exact_match label "exact match - holds between two entities that have strictly equivalent meanings, with a high degree of confidence" assertion.
- exact_matches label "exact matches - A list of terms from different schemas or terminology systems that have an identical meaning. Such terms often describe the same concept from different ontological perspectives." assertion.
- exon_to_transcript_relationship_object label "exon to transcript relationship object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- exon_to_transcript_relationship_subject label "exon to transcript relationship subject - connects an association to the subject of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- expected_count label "expected count - The expected (calculated) number of instances in a dataset/cohort whose records contain both the subject and object concept of an association if the subject and object concepts are independent." assertion.
- exposure_event_to_phenotypic_feature_association_subject label "exposure event to phenotypic feature association subject - connects an association to the subject of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- expressed_in label "expressed in - holds between a gene or gene product and an anatomical entity in which it is expressed" assertion.
- expresses label "expresses - holds between an anatomical entity and gene or gene product that is expressed there" assertion.
- expression_site label "expression site - location in which gene or protein expression takes place. May be cell, tissue, or organ." assertion.
- extraction_confidence_score label "extraction confidence score - A quantitative confidence value that represents the probability of obtaining a result at least as extreme as that actually obtained, assuming that the actual value was the result of chance alone." assertion.
- food_component_of label "food component of - holds between a one or more chemical entities present in food, irrespective of nutritional value (i.e. could also be a contaminant or additive)" assertion.
- form_or_variant_qualifier label "form or variant qualifier - A qualifier that composes with a core subject/object concept to define a specific type, variant, alternative version of this concept. The composed concept remains a subtype or instance of the core concept. For example, the qualifier ‘mutation’ combines with the core concept ‘Gene X’ to express the compose concept ‘a mutation of Gene X’." assertion.
- frequency_qualifier label "frequency qualifier - a qualifier used in a phenotypic association to state how frequent the phenotype is observed in the subject" assertion.
- full_name label "full name - a long-form human readable name for a thing" assertion.
- functional_association_object label "functional association object - class describing the activity, process or localization of the gene product" assertion.
- functional_association_subject label "functional association subject - gene, product or macromolecular complex that has the function associated with the GO term" assertion.
- gene_as_a_model_of_disease_association_subject label "gene as a model of disease association subject - A gene that has a role in modeling the disease. This may be a model organism ortholog of a known disease gene, or it may be a gene whose mutants recapitulate core features of the disease." assertion.
- gene_associated_with_condition label "gene associated with condition - holds between a gene and a disease or phenotypic feature that the gene or its alleles/products may influence, contribute to, or correlate with" assertion.
- gene_expression_mixin_quantifier_qualifier label "gene expression mixin quantifier qualifier - Optional quantitative value indicating degree of expression." assertion.
- gene_fusion_with label "gene fusion with - holds between two independent genes that have fused through translocation, interstitial deletion, or chromosomal inversion to form a new, hybrid gene. Fusion genes are often implicated in various neoplasms and cancers." assertion.
- gene_has_variant_that_contributes_to_disease_association_object label "gene has variant that contributes to disease association object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- gene_has_variant_that_contributes_to_disease_association_predicate label "gene has variant that contributes to disease association predicate - A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes." assertion.
- gene_has_variant_that_contributes_to_disease_association_subject label "gene has variant that contributes to disease association subject - A gene that has a role in modeling the disease. This may be a model organism ortholog of a known disease gene, or it may be a gene whose mutants recapitulate core features of the disease." assertion.
- gene_product_of label "gene product of - definition x has gene product of y if and only if y is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of thatf process is either y or something that is ribosomally translated from x" assertion.
- gene_to_disease_association_object label "gene to disease association object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- gene_to_disease_association_subject label "gene to disease association subject - gene in which variation is correlated with the disease, may be protective or causative or associative, or as a model" assertion.
- gene_to_entity_association_mixin_subject label "gene to entity association mixin subject - gene that is the subject of the association" assertion.
- gene_to_expression_site_association_object label "gene to expression site association object - location in which the gene is expressed" assertion.
- gene_to_expression_site_association_predicate label "gene to expression site association predicate - expression relationship" assertion.
- gene_to_expression_site_association_quantifier_qualifier label "gene to expression site association quantifier qualifier - can be used to indicate magnitude, or also ranking" assertion.
- gene_to_expression_site_association_stage_qualifier label "gene to expression site association stage qualifier - stage at which the gene is expressed in the site" assertion.
- gene_to_expression_site_association_subject label "gene to expression site association subject - Gene or gene product positively within the specified anatomical entity (or subclass, i.e. cellular component) location." assertion.
- gene_to_gene_association_object label "gene to gene association object - the object gene in the association. If the relation is symmetric, subject vs object is arbitrary. We allow a gene product to stand as a proxy for the gene or vice versa." assertion.
- gene_to_gene_association_subject label "gene to gene association subject - the subject gene in the association. If the relation is symmetric, subject vs object is arbitrary. We allow a gene product to stand as a proxy for the gene or vice versa." assertion.
- gene_to_gene_coexpression_association_predicate label "gene to gene coexpression association predicate - A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes." assertion.
- gene_to_gene_family_association_object label "gene to gene family association object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- gene_to_gene_family_association_predicate label "gene to gene family association predicate - membership of the gene in the given gene family." assertion.