Matches in Nanopublications for { ?s ?p ?o <http://purl.org/np/RAgtd3aIdF2e5dkgSNfhx-har1xvQec9iKAltf06lUd5c#assertion>. }
- assertion type AssertionTemplate assertion.
- association type IntroducedResource assertion.
- association type LocalResource assertion.
- comment type LongLiteralPlaceholder assertion.
- coordinates type LiteralPlaceholder assertion.
- lifecyclestage type RestrictedChoicePlaceholder assertion.
- nucleotidesequence type ExternalUriPlaceholder assertion.
- occurrence type ExternalUriPlaceholder assertion.
- organism type LocalResource assertion.
- organismAlt type ExternalUriPlaceholder assertion.
- relation type RestrictedChoicePlaceholder assertion.
- st12 type OptionalStatement assertion.
- st20 type OptionalStatement assertion.
- st25 type OptionalStatement assertion.
- st30 type RepeatableStatement assertion.
- st30 type OptionalStatement assertion.
- st81 type OptionalStatement assertion.
- st82 type OptionalStatement assertion.
- st90 type OptionalStatement assertion.
- taxon type LocalResource assertion.
- taxondef type ExternalUriPlaceholder assertion.
- taxonname type GuidedChoicePlaceholder assertion.
- timepoint type LiteralPlaceholder assertion.
- type label "is an instance of" assertion.
- comment label "has the free-text comment" assertion.
- sameAs label "is the same as" assertion.
- subject label "refers to" assertion.
- object label "links the organism to the nucleotide sequence" assertion.
- predicate label "refers to the relation" assertion.
- timepoint label "occurred at the time - points to time when this association happened" assertion.
- hasCycleStage label "has the life cycle stage" assertion.
- hasTaxonConceptDefinition label "is used as defined in" assertion.
- hasTaxonName label "has the name - links a taxon usage to a taxon name" assertion.
- hasOccurrence label "has the occurrence - links an organism to a record of a specific occurrence of it" assertion.
- hasLocationCoordinates label "has the location coordinates - points to the coordinates of the location where the association took place" assertion.
- OrganismToNucleotideSequenceAssociation label "an association of an organism to a nucleotide sequence" assertion.
- hasAssembledNucleotideSequence label "assembled nucleotide sequence" assertion.
- hasObservedNucleotideSequence label "observed nucleotide sequence" assertion.
- hasSequencedNucleotideSequence label "sequenced nucleotide sequence" assertion.
- assertion label "Expressing an association between an organism (source specimen) and a nucleotide sequence" assertion.
- association label "this association" assertion.
- comment label "short explanation related to the above statement" assertion.
- coordinates label "lat/long coordinates in format like '+47.37+8.54' or with altitude '+47.37+8.54+410.5'" assertion.
- lifecyclestage label "select the life cycle stage of the organism; leave blank if unknown" assertion.
- nucleotidesequence label "INSDC / Genbank accession number (e.g. https://www.ncbi.nlm.nih.gov/nuccore/...)" assertion.
- occurrence label "occurrence URI from GBIF (https://www.gbif.org/occurrence/...) or iDigBio, BOLD, PlutoF, etc." assertion.
- organism label "the organism" assertion.
- organismAlt label "any existing URI identifier of organism (e.g. of digital collection specimen or observation in nature)" assertion.
- relation label "the relation between the organism and the nucleotide sequence" assertion.
- taxon label "the taxon concept" assertion.
- taxondef label "publication DOI (https://doi.org/...) or taxon treatment ID (https://treatment.plazi.org/id/...)" assertion.
- taxonname label "search and select from list (if not found, you may paste URL from IPNI, MycoBank, Index Fungorum, or ZooBank)" assertion.
- timepoint label "time expressed in XSD DateTime format, e.g. '2023-03-30T22:17:11Z'" assertion.
- assertion hasDefaultProvenance RA2VjRiJ5AsNnPHDXuOqvsEJwTwqtj5rBb-OFkpPOzd9s assertion.
- st09 object organism assertion.
- st00 object OrganismToNucleotideSequenceAssociation assertion.
- st05 object relation assertion.
- st10 object taxon assertion.
- st11 object taxonname assertion.
- st12 object taxondef assertion.
- st20 object lifecyclestage assertion.
- st25 object occurrence assertion.
- st30 object organismAlt assertion.
- st39 object nucleotidesequence assertion.
- st81 object coordinates assertion.
- st82 object timepoint assertion.
- st90 object comment assertion.
- st09 predicate subject assertion.
- st00 predicate type assertion.
- st05 predicate predicate assertion.
- st10 predicate type assertion.
- st11 predicate hasTaxonName assertion.
- st12 predicate hasTaxonConceptDefinition assertion.
- st20 predicate hasCycleStage assertion.
- st25 predicate hasOccurrence assertion.
- st30 predicate sameAs assertion.
- st39 predicate object assertion.
- st81 predicate hasLocationCoordinates assertion.
- st82 predicate timepoint assertion.
- st90 predicate comment assertion.
- st09 subject association assertion.
- st00 subject association assertion.
- st05 subject association assertion.
- st10 subject organism assertion.
- st11 subject taxon assertion.
- st12 subject taxon assertion.
- st20 subject organism assertion.
- st25 subject organism assertion.
- st30 subject organism assertion.
- st39 subject association assertion.
- st81 subject association assertion.
- st82 subject association assertion.
- st90 subject ASSERTION assertion.
- assertion description "<p>Such a nanopublication expresses an association between an organism (normally identified as belonging to a certain taxon concept) and a nucleotide sequence (that can correspond to a gene or subunit of a gene), for example expressing that Sequence ID (INSDC / Genbank accession number or BOLD Process ID) identifies Organism X as belonging to a Taxon Concept Y.</p>" assertion.
- coordinates hasRegex "[+-][0-9]+(\.[0-9]+)?[+-][0-9]+(\.[0-9]+)?([+-][0-9]+(\.[0-9]+)?)?" assertion.
- taxondef hasRegex "(https://doi.org/|https://treatment.plazi.org/id/).+" assertion.
- timepoint hasRegex "-?([1-9]\d\d\d+|0\d\d\d)-(0[1-9]|1[0-2])-(0[1-9]|[12]\d|3[01])T(([01]\d|2[0-3]):[0-5]\d:[0-5]\d(\.\d+)?|24:00:00(\.0+)?)(Z|[+-](0\d|1[0-4]):[0-5]\d)?" assertion.
- relation possibleValue hasAssembledNucleotideSequence assertion.
- relation possibleValue hasObservedNucleotideSequence assertion.
- relation possibleValue hasSequencedNucleotideSequence assertion.